Version Kingdom Symbol Organism 2010-04 2010-04 2009-11 2009-09 2009-08 2008-03 2007-06 Old Symbol 2007-02 2006-06 2006-06 2006-06 2006-06 2006-06 @ @
@ @ @ 2009.11.18 @ @ @ @ @ @ @ @ @ @ @ @ @ @
Organism ID @ @ Gclust2010 Cyanoclust4 Cyanoclust3 Cyano40 Nod50 @ ALL95 @ CZ36 Nod30b CZ35 ALL145_0x Mt23 CPBACT8x unused @
@ @ @ @ @ Cyanoclust2 @ @ @ @ @ NCBI, Dec 2004 + Aug 2006 @ NCBI, Dec 2004 @ @ @ @
@ @ Alpha-proteobacteria @ @ @ @ @ @ @ @ @ @ @ @ @ @
126 1 Atc Agrobacterium tumefaciens str. C58 Cereon * * * @ NC_003062-5 (2009) @ @ @ @ @ @ @ @ @ @
1 1 Atu Agrobacterium tumefaciens str. C58 U Wash @ @ @ @ @ @ NC_003304-6, 8 (2006) Atu @ NC_003304-6, 8 (2006) @ NC_003304-6, 8 (2004) @ @ @
116 1 Azc Azorhizobium caulinodans ORS 571 * @ @ @ NC_009937 (2009) @ @ @ @ @ @ @ @ @ @
117 1 Bbt Bradyrhizobium sp. BTAi1 * @ @ @ NC_009475,85 (2009) @ @ @ @ @ @ @ @ @ @
14 1 Bja Bradyrhizobium japonicum USDA 110 * @ @ @ NC_004463 (2009) @ NC_004463 (2007) Bja @ @ @ NC_004463 @ @ @
18 1 Bms Brucella suis 1330 * @ @ @ NC_004310-1 (2009) @ NC_004310-11 (2007) Bms @ @ @ NC_004310-11 @ @ @
118 1 Bra Bradyrhizobium sp. ORS 278 * @ @ @ NC_009445 (2009) @ @ @ @ @ @ @ @ @ @
24 1 Ccr Caulobacter crescentus CB15 * @ @ @ NC_002696 (2009) @ NC_002696 (2007) Ccr @ @ @ NC_002696 @ @ @
106 1 Gox Gluconobacter_oxydans_621H * @ @ @ NC_006672-7 (2009) @ NC_006672-7 (2006) Gox @ NC_006677 @ @ @ @ @
125 1 Mea Methylobacterium extorquens AM1 * @ @ @ NC_012807-11 (2009) @ @ @ @ @ @ @ @ @ @
110 1 Mes Mesorhizobium sp. BNC1 * @ @ @ NC_008242-4,54 (2009) @ NC_008242-4,54 (2007) Mes NC_008254 @ @ @ @ @
55 1 Mlo Mesorhizobium loti MAFF303099 * @ @ @ NC_002678,9,82 (2009) @ NC_002678,9,82 (2006) Mlo NC_002678 (2005) @ NC_002678 (2004) @ @ @
119 1 Mno Methylobacterium nodulans ORS 2060 * @ @ @ NC_-11887-90,92-95 (2009) @ @ @ @ @ @ @
122 1 Rec Rhizobium etli CIAT 652 * @ @ @ NC_010994-8 (2009) @ @ @ @ @ @ @
109 1 Rhe Rhizobium etli CFN 42 * @ @ @ NC_007761-6, NC_004041 (2009) @ NC_007761-6, NC_004041 (2007) Rhe NC_007761-6, NC_004041 @ @ @ @ @
121 1 Rhi Rhizobium sp. NGR234 * @ @ @ NC_000914,012586-7 (2009) @ @ @ @ @ @ @
113 1 Rle Rhizobium leguminosarum@bv viciae 3841 * @ @ @ NC_008378-84 (2009) @ NC_008378-84 (2007) @ @ @ @ @
123 1 Rlg Rhizobium leguminosarum@bv trifolii WSM1325 * @ @ @ NC_012848,50,52-4,58 (2009) @ @ @ @ @ @ @
124 1 Rlt Rhizobium leguminosarum@bv trifolii WSM2304 * @ @ @ NC_011366,68-71 (2009) @ @ @ @ @ @ @
105 1 Sil Ruegeria (Silicibacter) pomeroyi DSS-3 * @ @ @ NC_003911,006569 (2009) @ @ Sil @ @ @ @ NC_003911, NC_006569
120 1 Smd Sinorhizobium medicae WSM 419 * @ @ @ NC_009620-22,36 (2009) @ @ @ @ @ @ @
83 1 Sme Sinorhizobium meliloti 1021 * @ @ @ NC_003037,47,78 (2009) @ NC_003037,47,78 (2007) Sme @ NC_003047 @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Gamma-proteobacteria @ @ @ @ @ @ @ @ @ @ @ @ @ @
2 1 Aci Acinetobacter sp. ADP1 @ @ @ @ @ @ @ Aci @ @ @ NC_005966 @ @ @
16 1 Blo Bifidobacterium longum NCC2705 @ @ @ @ @ @ @ Blo @ @ @ NC_004307 @ @ @
22 1 Cbu Coxiella burnetii RSA 493 @ @ @ @ @ @ @ Cbu @ @ @ NC_002971 @ @ @
37 1 Eca Erwinia carotovora subsp. atroseptica SCRI1043 @ @ @ @ @ @ @ Eca @ @ @ NC_004547 @ @ @
36 1 Eco Escherichia coli K-12 MG1655 * * * @ NC_000913 (2009) @ NC_000913 EC @ NC_000913 NC_000913 U00096 (2001) @ @ @
38 1 Ecs Escherichia coli O157:H7 @ @ @ @ @ @ @ Ecs @ @ @ NC_002695 @ @ @
128 1 Ftu Francisella tularensis tularensis * @ @ @ NC_006570 (2009) @ @ @ @ @ @ @ @ @ @
42 1 Hin Haemophilus influenzae Rd KW20 @ @ @ @ @ @ @ Hin @ @ @ NC_000907 @ @ @
49 1 Lpf Legionella pneumophila str. Lens @ @ @ @ @ @ @ Lpf @ @ @ NC_006369 @ @ @
52 1 Mca Methylococcus capsulatus str. Bath @ @ @ @ @ @ @ Mca @ @ @ NC_002977 @ @ @
58 1 Msu Mannheimia succiniciproducens MBEL55E @ @ @ @ @ @ @ Msu @ @ @ NC_006300 @ @ @
65 1 Pae Pseudomonas aeruginosa PA01 @ @ @ @ @ @ @ Pae @ @ @ NC_002516 @ @ @
68 1 Plu Photorhabdus luminescens subsp. laumondii TTO1 @ @ @ @ @ @ @ Plu @ @ @ NC_005126 @ @ @
69 1 Pmu Pasteurella multocida Pm70 @ @ @ @ @ @ @ Pmu @ @ @ NC_002663 @ @ @
71 1 Ppr Photobacterium profundum SS9 @ @ @ @ @ @ @ Ppr @ @ @ NC_006370-1, NC_005871 @ @ @
72 1 Ppu Pseudomonas putida KT2440 @ @ @ @ @ @ @ Ppu @ @ @ NC_002947 @ @ @
73 1 Pst Pseudomonas syringae pv. tomato str. DC3000 * @ @ @ NC_004578,4632-3 (2009) @ NC_004578,4632-3 (2007) Pst @ NC_004578 @ NC_004578 @ @ @
82 1 Sfl Shigella flexneri 2a str. 301 @ @ @ @ @ @ @ Sfl @ @ @ NC_004337 @ @ @
84 1 Son Shewanella oneidensis MR-1 @ @ @ @ @ @ @ Son @ @ @ NC_004347 @ @ @
88 1 Stm Salmonella typhimurium LT2 @ @ @ @ @ @ @ Stm @ @ @ NC_003197 @ @ @
95 1 Vch Vibrio cholerae O1 biovar eltor str. N16961 * @ @ @ NC_002505-6 (2009) @ @ Vch @ @ @ NC_002505-6 @ @ @
96 1 Vvy Vibrio vulnificus YJ016 @ @ @ @ @ @ NC_005139-40, NC_005128 (2007) Vvy @ NC_005139-40, NC_005128 @ NC_005139-40, NC_005128 @ @ @
99 1 Xcc Xanthomonas campestris pv. campestris str. ATCC 33913 @ @ @ @ @ @ @ Xcc @ @ @ NC_003902 @ @ @
100 1 Xfa Xylella fastidiosa 9a5c NC_002488-90 @ @ @ @ @ @ Xfa @ @ @ NC_002488 @ @ @
101 1 Ype Yersinia pestis NC_003131,2,4,43 @ @ @ @ @ @ Ype @ @ @ NC_003143 @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Beta-proteobacteria @ @ @ @ @ @ @ @ @ @ @ @ @ @
127 1 Azo Azoarcus sp. BH72 [beta] * @ @ @ NC_008702 (2009) @ @ @ @ @ @ @ @ @ @
17 1 Bma Burkholderia mallei ATCC 23344 [beta] NC_006348,9 @ * @ @ @ NC_006348-9 (2007) Bma @ NC_006348-9 @ NC_006348-9 @ @ @
19 1 Bpe Bordetella pertussis Tohama I [beta] * @ @ @ NC_002929 (2009) @ NC_002929 (2007) Bpe @ NC_002929 @ NC_002929 @ @ @
115 1 Bph Burkholderia phymatum STM815 [beta] * @ @ @ NC_010622,3,5,7 (2009) @ @ @ @ @ @ @ @ @ @
114 1 Cti Cupriavidus taiwanensis [beta] * @ @ @ NC_010528-30 (2009) @ @ @ @ @ @ @ @ @ @
102 1 Eba Aromatoleum aromaticum (Azoarcus sp) EbN1 [beta] * @ @ @ NC_006513 (2009) @ NC_006513, NC_006823-4 (2007) Eba @ NC_006513, NC_006823-4 @ @ @ @ @
60 1 Neu Nitrosomonas europaea ATCC 19718 [beta] @ @ @ @ @ @ @ Neu @ @ @ NC_004757 @ @ @
62 1 Nme Neisseria meningitidis MC58 [beta] @ @ @ @ @ @ @ Nme @ @ @ NC_003112 @ @ @
76 1 Rso Ralstonia solanacearum GMI1000 [beta] * @ @ @ NC_003295-6 (2009) @ NC_003295-6 (2007) Rso @ NC_003295 @ NC_003295 @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Delta-proteobacteria @ @ @ @ @ @ @ @ @ @ @ @ @ @
8 1 Bba Bdellovibrio bacteriovorus HD100 [delta] @ @ @ @ @ @ @ Bba @ @ @ NC_005363 @ @ @
33 1 Dps Desulfotalea psychrophila LSv54 [delta] @ @ @ @ @ @ @ Dps @ @ @ NC_006138 @ @ @
35 1 Dvu Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough [delta] @ @ @ @ @ @ @ Dvu @ @ @ NC_002937 @ @ @
41 1 Gsu Geobacter sulfurreducens PCA [delta] @ @ @ @ @ @ @ Gsu @ @ @ NC_002939 @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Epsilon-proteobacteria @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
26 1 Cje Campylobacter jejuni subsp. jejuni NCTC 11168 [epsilon] @ @ @ @ @ @ @ Cje @ @ @ NC_002163 @ @ @
43 1 Hpy Helicobacter pylori 26695 [epsilon] @ @ @ @ @ @ @ Hpy @ @ @ NC_000915 @ @ @
98 1 Wsu Wolinella succinogenes DSM 1740 [epsilon] @ @ @ @ @ @ @ Wsu @ @ @ NC_005090 @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Firmicutes @ @ @ @ @ @ @ @ @ @ @ @ @ @
6 1 Bar Bacillus anthracis str. Ames @ @ @ @ @ @ @ Bar @ @ @ NC_003997 @ @ @
10 1 Bca Bacillus cereus ATCC 10987 @ @ @ @ @ @ @ Bca @ @ @ NC_003909 @ @ @
12 1 Bha Bacillus halodurans C-125 @ @ @ @ @ @ @ Bha @ @ @ NC_002570 @ @ @
15 1 Bld Bacillus licheniformis DSM 13 @ @ @ @ @ @ @ Bld @ @ @ NC_006322 @ @ @
4 1 Bsu Bacillus subtilis Marburg 168 * @ * @ NC_000964 (2009) @ NC_000964 BS @ NC_000964 NC_000964 AL009126 (2001) @ @ @
20 1 Btk Bacillus thuringiensis serovar konkukian str. 97-27 @ @ @ @ @ @ @ Btk @ @ @ NC_005957 @ @ @
29 1 Cpe Clostridium perfringens str. 13 @ @ @ @ @ @ @ Cpe @ @ @ NC_003042 @ @ @
30 1 Ctc Clostridium tetani E88 @ @ @ @ @ @ @ Ctc @ @ @ NC_004557 @ @ @
39 1 Efa Enterococcus faecalis V583 @ @ @ @ @ @ @ Efa @ @ @ NC_004668 @ @ @
45 1 Lin Listeria innocua Clip11262 @ @ @ @ @ @ @ Lin @ @ @ NC_003212, NC_003383 @ @ @
46 1 Ljo Lactobacillus johnsonii NCC 533 @ @ @ @ @ @ @ Ljo @ @ @ NC_005362 @ @ @
47 1 Lla Lactococcus lactis subsp. lactis Il1403 @ @ @ @ @ @ @ Lla @ @ @ NC_002662 @ @ @
48 1 Lmo Listeria monocytogenes EGD-e @ @ @ @ @ @ @ Lmo @ @ @ NC_003210 @ @ @
50 1 Lpl Lactobacillus plantarum WCFS1 @ @ @ @ @ @ @ Lpl @ @ @ NC_004567 @ @ @
63 1 Oih Oceanobacillus iheyensis HTE831 @ @ @ @ @ @ @ Oih @ @ @ NC_004193 @ @ @
78 1 Sam Staphylococcus aureus subsp. aureus MW2 @ @ @ @ @ @ @ Sam @ @ @ NC_003923 @ @ @
79 1 San Streptococcus agalactiae NEM316 @ @ @ @ @ @ @ San @ @ @ NC_004368 @ @ @
81 1 Sep Staphylococcus epidermidis ATCC 12228 * @ @ @ NC_004461,5003-8 (2009) @ NC_004461,5003-8 (2007) Sep @ NC_004461 @ NC_004461 @ @ @
85 1 Spn Streptococcus pneumoniae TIGR4 @ @ @ @ @ @ @ Spn @ @ @ NC_003028 @ @ @
86 1 Spy Streptococcus pyogenes M1 GAS @ @ @ @ @ @ @ Spy @ @ @ NC_002737 @ @ @
87 1 Sth Symbiobacterium thermophilum @ @ @ @ @ @ @ Sth @ @ @ NC_006177 @ @ @
91 1 Tte Thermoanaerobacter tengcongensis @ @ @ @ @ @ @ Tte @ @ @ NC_003869 @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Actinobacteria @ @ @ @ @ @ @ @ @ @ @ @ @ @
25 1 Cgl Corynebacterium glutamicum ATCC 13032 @ @ @ @ @ @ @ Cgl @ @ @ NC_003450 @ @ @
112 1 Fal Frankia alni ACN14a * @ @ @ NC_008278 (2009) @ NC_008278 (2007) Fal @ NC_008278 @ @ @ @ @
111 1 Fra Frankia sp. CcI3 * @ @ @ NC_007777 (2009) @ NC_007777 (2007) Fra @ NC_007777 @ @ @ @ @
51 1 Lxx Leifsonia xyli subsp. xyli str. CTCB07 @ @ @ @ @ @ @ Lxx @ @ @ NC_006087 @ @ @
59 1 Mtu Mycobacterium tuberculosis H37Rv * @ @ @ NC_000962 (2009) @ NC_000962 (2007) Mtu @ NC_000962 @ NC_000962 @ @ @
61 1 Nfa Nocardia farcinica @ @ @ @ @ @ @ Nfa @ @ @ NC_006361-3 @ @ @
64 1 Pac Propionibacterium acnes KPA171202 @ @ @ @ @ @ @ Pac @ @ @ NC_006085 @ @ @
80 1 Sco Streptomyces coelicolor A3(2) * @ @ @ NC_003888,3903-4 (2009) @ NC_003888, NC_003903-4 (2007) Sco @ NC_003888, NC_003903-4 @ NC_003888, NC_003903-4 @ @ @
93 1 Tws Tropheryma whipplei TW08/27 @ @ @ @ @ @ @ Tws @ @ @ NC_004551 @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Other bacteria @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
44 1 Lil Leptospira interrogans serovar Lai str. 56601 [spirochetes] NC_004342,3 @ @ @ @ @ @ Lil @ @ @ NC_004342-3 @ @ @
11 1 Bfr Bacteroides fragilis [bacteroidetes] @ @ @ @ @ @ @ Bfr @ @ @ NC_006297, NC_006347 @ @ @
67 1 Pgi Porphyromonas gingivalis W83 [bacteroidetes] @ @ @ @ @ @ @ Pgi @ @ @ NC_002950 @ @ @
89 1 Tma Thermotoga maritima MSB8 [hyperthermopiles] @ @ @ @ @ @ @ Tma @ @ @ NC_000853 @ @ @
34 1 Dra Deinococcus radiodurans R1 [Deinococcus-Thermus] * @ NC_001263-4, NC_000958-9 @ @ @ @ Dra @ @ @ NC_001263, NC_000958 @ @ @
92 1 Tth Thermus thermophilus HB27 [Deinococcus-Thermus] NC_005835,8 @ @ @ @ @ @ Tth @ @ @ NC_005835, NC_005838 @ @ @
40 1 Fnu Fusobacterium nucleatum subsp. nucleatum ATCC 25586 [fusobacteria] @ @ @ @ @ @ @ Fnu @ @ @ NC_003454 @ @ @
108 1 Rba Rhodopirellula baltica SH 1 (Pirellula sp.) [planctomycete] * @ @ @ NC_005027 (2009) @ @ Rba @ @ @ @ @ @ NC_005027
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Small-genome bacteria @ @ @ @ @ @ @ @ @ @ @ @ @ @
1 1 Aae Aquifex aeolicus VF5 [hyperthermophiles] @ @ @ @ @ @ @ Aae @ @ @ NC_000918 @ @ @
103 1 Ama Anaplasma marginale St Maries [alpha] * @ @ @ NC_004842 (2009) @ @ Ama @ @ @ @ @ @ NC_004842
5 1 Bab Buchnera aphidicola (Baizongia pistaciae) [gamma] @ @ @ @ @ @ @ Bab @ @ @ NC_004545 @ @ @
7 1 Bas Buchnera aphidicola str. Sg (Schizaphis graminum) [gamma] @ @ @ @ @ @ @ Bas @ @ @ NC_004061 @ @ @
9 1 Bbu Borrelia burgdorferi B31 [spirochetes] @ @ @ @ @ @ @ Bbu @ @ @ NC_001318 @ @ @
13 1 Bhe Bartonella henselae str. Houston-1 [alpha] @ @ @ @ @ @ @ Bhe @ @ @ NC_005956 @ @ @
21 1 Buc Buchnera aphidicola str. APS (Acyrthosiphon pisum) [gamma] NC_002252,3,2528 @ @ @ @ @ @ Buc @ @ @ NC_002528 @ @ @
23 1 Cca Chlamydophila caviae GPIC [chlamydiae] NC_003361,4720 @ @ @ @ @ @ Cca @ @ @ NC_003361, NC_004720 @ @ @
27 1 Cmu Chlamydia muridarum [chlamydiae] @ @ @ @ @ @ @ Cmu @ @ @ NC_002620, NC_002182 @ @ @
28 1 Cpa Chlamydophila pneumoniae AR39 [chlamydiae] @ @ @ @ @ @ @ Cpa @ @ @ NC_002179 @ @ @
31 1 Ctr Chlamydia trachomatis D/UW-3/CX [chlamydiae] NC_000117 @ @ @ @ @ @ Ctr @ @ @ NC_000117 @ @ @
104 1 Erg Ehrlichia_ruminantium_Gardel [alpha] * @ @ @ NC_006831 (2009) @ @ Erg @ @ @ @ @ @ NC_006831
53 1 Mfl Mesoplasma florum L1 [tenericute] @ @ @ @ @ @ @ Mfl @ @ @ NC_006055 @ @ @
54 1 Mge Mycoplasma genitalium G-37 [tenericute] NC_000908 @ @ @ @ @ @ Mge @ @ @ NC_000908 @ @ @
56 1 Mmo Mycoplasma mobile 163K [tenericute] @ @ @ @ @ @ @ Mmo @ @ @ NC_006908 @ @ @
57 1 Mpn Mycoplasma pneumoniae M129 [tenericute] @ @ @ @ @ @ @ Mpn @ @ @ NC_000912 @ @ @
66 1 Pcu Parachlamydia sp. UWE25 [chlamydiae] @ @ @ @ @ @ @ Pcu @ @ @ NC_005861 @ @ @
70 1 Poy Onion yellows phytoplasma OY-M [tenericute] @ @ @ @ @ @ @ Poy @ @ @ NC_005303 @ @ @
74 1 Rco Rickettsia conorii str. Malish 7 [alpha] @ @ @ @ @ @ @ Rco @ @ @ NC_003103 @ @ @
75 1 Rpr Rickettsia prowazekii str. Madrid E [alpha] NC_000963 @ @ @ @ @ @ Rpr @ @ @ NC_000963 @ @ @
77 1 Rty Rickettsia typhi str. Wilmington [alpha] @ @ @ @ @ @ @ Rty @ @ @ NC_006142 @ @ @
90 1 Tpa Treponema pallidum subsp. pallidum str. Nichols [spirochetes] @ @ @ @ @ @ @ Tpa @ @ @ NC_000919 @ @ @
94 1 Uur Ureaplasma parvum serovar 3 str. ATCC 700970 [tenericute] @ @ @ @ @ @ @ Uur @ @ @ NC_002162 @ @ @
97 1 Wol Wolbachia endosymbiont of Drosophila melanogaster [alpha] @ @ @ @ @ @ @ Wol @ @ @ NC_002978. @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Archaea @ @ @ @ @ @ @ @ @ @ @ @ @ @
501 2 Afu Archaeoglobus fulgidus DSM 4304 * @ @ @ NC_000917 (2009) @ NC_000917 (2007) Afu @ NC_000917 @ NC_000917 @ @ @
502 2 Ape Aeropyrum pernix K1 NC_000854 @ @ @ @ @ NC_000854 (2007) Ape @ @ @ NC_000854 @ @ @
503 2 Hal Halobacterium sp. NRC-1 * @ @ @ NC_001869,002607-8 (2009) @ NC_001869,2607-8 (2007) Hal @ NC_002607, NC_002608 @ NC_002607, NC_002608 @ @ @
504 2 Mac Methanosarcina acetivorans str. C2A NC_003552 @ @ @ @ @ NC_003552 (2007) Mac @ @ @ NC_003552 @ @ @
505 2 Mja Methanocaldococcus jannaschii DSM 2661 @ @ @ @ @ @ @ Mja @ @ @ NC_000909, NC_001732-3 @ @ @
506 2 Mka Methanopyrus kandleri AV19 @ @ @ @ @ @ @ Mka @ @ @ NC_003551 @ @ @
507 2 Mth Methanothermobacter thermautotrophicus @ @ @ @ @ @ @ Mth @ @ @ NC_000916 @ @ @
513 2 Neq Nanoarchaeum equitans Kin4-M NC_005213 @ @ @ @ @ NC_005213 (2007) @ @ @ @ @ @ @ @
508 2 Pai Pyrobaculum aerophilum str. IM2 @ @ @ @ @ @ @ Pai @ @ @ NC_003364 @ @ @
509 2 Pho Pyrococcus horikoshii OT3 NC_000961 @ @ @ @ @ NC_000961 (2007) Pho @ @ @ NC_000961 @ @ @
510 2 Pto Picrophilus torridus DSM 9790 @ @ @ @ @ @ @ Pto @ @ @ NC_005877 @ @ @
511 2 Sto Sulfolobus tokodaii str. 7 NC_003106 @ @ @ @ @ NC_003106 (2007) Sto @ @ @ NC_003106 @ @ @
512 2 Tac Thermoplasma acidophilum DSM 1728 @ @ @ @ @ @ @ Tac @ @ @ NC_002578 @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Cyanobacteria @ @ @ @ @ @ @ @ @ @ @ @ @ @
433 1 Amar Acaryochloris marina MBIC11017 NC_009925-34 * * NC_009925-9934 @ NC_009925-9934 @ @ @ @ @ @ @ @ @
441 1 Amax Arthrospira maxima CS-328 * RefSeq NZ_ABYK @ @ @ @ @ @ @ @ @ @ @ @ @
401 1 Ana Anabaena sp. PCC 7120 * @ * @ AP003602-6,BA000019 (2009) @ @ Ana @ BA000019-20, AP003602-7 @ BA000019-20, AP003602-7 @ @ @
435 1 ‚`‚‚Œ ‚`‚’‚”‚ˆ‚’‚‚“‚‚‰‚’‚@‚‚Œ‚‚”‚…‚Ž‚“‚‰‚“@NIES 19 * AP011615 @ project @ @ @ @ @ @ @ @ @ @ @
402 1 Ava Anabaena variabilis ATCC 29413 * @ * @ @ @ @ Ava @ @ NC_007413 @ @ @ JGI, Jan 2005 JGI, Jun 2005
439 1 Cth1 Cyanothece PCC8801 NC_011721,3,6,7 * * CP001287-90 @ @ @ @ @ @ @ @ @ @ @
436 1 Cth2 Cyanothece ATCC51142 NC_010539,41-3,46,47 * * CP000806-811 @ @ @ @ @ @ @ @ @ @ @
437 1 Cth4 Cyanothece PCC7424 NC_011729,30,32-4,37,38 * * CP001291-7 @ @ @ @ @ @ @ @ @ @ @
438 1 Cth5 Cyanothece PCC7425 NC_011880,2,4,5 * * CP001344-7 @ @ @ @ @ @ @ @ @ @ @
428 1 Cwat Crocosphaera watsonii WH8501 * * * @ @ JGI 2008 Mar 10feb04 @ @ @ @ @ @ @ @ @
412 1 Glv Gloeobacter violaceus * * * @ BA000045 (2009) @ NC_005125 Glv @ BA000045 @ BA000045 @ @ @
429 1 Mae Microcystis aeruginosa NIES843 NC_010296 * * NC_010296 @ NC_010296 @ @ @ @ @ @ @ @ @
403 1 Npun Nostoc punctiforme sp. PCC73102 * @ * @ CP001037-42 (2009) @ @ Npun @ JGI, Dec 2003 @ JGI, Dec 2003 @ @ @
406 1 Pm1 Prochlorococcus marinus CCMP 1986,1378 (MED4) new * * @ @ @ NC_005072 Pm1 @ @ @ NC_007513 (2003) @ @ @
407 1 Pm2 Prochlorococcus marinus MIT9313 new * * @ @ @ NC_005071 Pm2 @ @ @ NC_005071 (2003) @ @ @
408 1 Pm3 Prochlorococcus marinus CCMP1375 (SS120) new * * @ @ @ NC_005042 Pm3 @ @ @ AE017126 (2003) @ @ @
415 1 Pm4 Prochlorococcus marinus MIT9312 new * * @ @ @ NC_007577 Pm4 @ CP000111 @ @ @ @ @
416 1 Pm5 Prochlorococcus marinus NATL2A new * * @ @ @ NC_007335 Pm5 @ CP000095 @ @ @ @ @
420 1 Pm6 Prochlorococcus marinus MIT9301 new * * @ @ @ NC_009091 @ @ @ @ @ @ @ @
421 1 Pm7 Prochlorococcus marinus MIT9303 new * * @ @ @ NC_008820 @ @ @ @ @ @ @ @
422 1 Pm8 Prochlorococcus marinus MIT9315 new * * @ @ @ NC_008817 @ @ @ @ @ @ @ @
423 1 Pm9 Prochlorococcus marinus NATL1A new * * @ @ @ NC_008819 @ @ @ @ @ @ @ @
424 1 PmA Prochlorococcus marinus AS9601 new * * @ @ @ NC_008816 @ @ @ @ @ @ @ @
426 1 PmB Prochlorococcus marinus MIT9211 new * * @ @ NC_009976 @ @ @ @ @ @ @ @ @
427 1 PmC Prochlorococcus marinus MIT9215 new * * @ @ NC_009840 @ @ @ @ @ @ @ @ @
431 1 S307 Synechococcus sp. RCC307 new * * @ @ NC_009482 @ @ @ @ @ @ @
434 1 S57 Synechococcus sp.WH5701 * * * @ @ NZ_AANO00000000 @ @ @ @ @ @ @
410 1 S63 Synechococcus sp. PCC 6301 new * * @ @ @ NC_006576 S63 @ NC006576 NC006576 NC006576 @ @ Nagoya, Jul 2004
430 1 S70 Synechococcus sp. PCC7002 new * * @ @ NC_010474-480 @ @ @ @ @ @ @ @
432 1 S78 Synechocossus sp. WH7803 new * * @ @ NC_009481 @ @ @ @ @ @ @ @
425 1 S79 Synechococcus sp. PCC 7942 new * * @ @ @ NC_007604, 7595 @ @ @ @ @ @ @
409 1 S81 Synechococcus sp. WH8102 new * * @ @ @ NC_005070 S81 @ @ @ NC_005070 (2003) @ @ @
419 1 S93 Synechococcus sp. CC9311 new * * @ @ @ NC_008319 @ @ @ @ @ @ @
413 1 S96 Synechococcus sp. 9605 new * * @ @ @ NC_007516 S96 @ @ @ NC_007516 @ @ @
414 1 S99 Synechococcus sp. 9902 new * * @ @ @ NC_007513 S99 @ @ @ NC_007513 @ @ @
404 1 Syn Synechocystis sp. PCC 6803 * * * @ AP004310-2,AP006585,BA000022 (2009) @ NC_000911,5229-32 Syn @ @ @ AB001339 @ @ @
411 1 Tel Thermosynechococcus elongatus * * * @ BA000039 (2009) @ NC_004113 Tel @ @ @ BA000039 @ @ @
405 1 Ter Trichodesmium erythraeum 405 1 new * * @ @ @ NC_008312 TE @ @ @ @ @ @ JGI, Oct 2004
440 1 Ucyn Cyanobacterium UCYN_A * * @ @ @ @ @ @ @ @ @ @ @ @
417 1 YelA Cyanobacterium Yellowstone A-prime * * * @ @ @ CP000239 YelA @ @ NC_007775 @ @ @ @
418 1 YelB Cyanobacterium Yellowstone B-prime * * * @ @ @ CP000240 YelB @ @ NC_007776 @ @ @ @
@ 1 Cth3 Cyanothece PCC8802 NC_013163 @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Photosynthetic bacteria (purple) @ @ @ @ @ @ @ @ @ @ @ @ @ @
452 1 Rrub Rhodospirillum rubrum ATCC 11170 NC_007641,3 * * @ NC_007641,3 (2009) @ NC_007643 Rrub @ NC_007643 @ NC_007643 @ @ JGI, Jun 2005
@ @ Rcen Rhodospirillum centenum SW NC_011420 @ @ @ @ @ @ @ @ @ @ @ @ @ @
455 1 Rpal Rhodopsudomonas palustris CGA009 NC_005296,7 * * @ NC_005296-7 (2009) @ NC_005296 Rpal @ NC_005296 BX571963 (2004) NC_005296 @ @ @
460 1 Rsp Rhodobacter sphaeroides 2 4 1 NC_007488-90,93,94,9007,8 @ @ @ @ @ NC_007488-90,93,94,9007,8 @ @ @ @ @ @ @ @
461 1 Rsh Rhodobacter sphaeroides ATCC 17029 NC_009040,49,50 @ @ @ @ @ NC_9040,49,50 @ @ @ @ @ @ @ @
@ @ Rsh2 Rhodobacter sphaeroides ATCC 17025 NC_009428-33 @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Rsh3 Rhodobacter sphaeroides KD131 NC_011958,60,62,63 @ @ @ @ @ @ @ @ @ @ @ @ @ @
462 1 Rde Roseobacter denitrificans OCh 114 * @ @ @ @ @ NC_008209,8386-9 @ @ @ @ @ @ @ @
463 1 Rpa1 Rhodopseudomonas palustris BisA53 NC_008435 @ @ @ @ @ NC_008435 @ @ @ @ @ @ @ @
464 1 Rpa2 Rhodopseudomonas palustris BisB5 NC_007958 @ @ @ @ @ NC_007958 @ @ @ @ @ @ @ @
465 1 Rpa3 Rhodopseudomonas palustris BisB18 NC_007925 @ @ @ @ @ NC_007925 @ @ @ @ @ @ @ @
466 1 Rpa4 Rhodopseudomonas palustris HaA2 NC_007778 @ @ @ @ @ NC_007778 @ @ @ @ @ @ @ @
@ @ Rpa5 Rhodopseudomonas palustris TIE1 NC_011004 @ @ @ @ @ @ @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Photosynthetic bacteria (green sulfur) @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
500 1 Clim Chlorobium limicola DSM 245 NC_010803 @ @ @ @ @ @ Clim @ @ @ @ @ @ JGI, Oct 2004
453 1 Ctep Clorobium tepidum NC_002932 @ @ @ @ @ NC_002392 Ctep @ @ NC_002932 @ @ @ @
456 1 Cch Chlorobium chlorochromatii CaD3 NC_007514 @ @ @ @ @ NC_007514 @ @ @ @ @ @ @ @
457 1 Cph Chlorobium phaeobacteroides DSM266 NC_008639 @ @ @ @ @ NC_008639 @ @ @ @ @ @ @ @
@ @ Clut Chlorobium luteolum DSM273 NC_007512 @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Cphb Chlorobium phaeobacteroides BS1 NC_010831 @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Prae Prosthecochloris aestuarii DSM271 NC_011059,61 @ @ @ @ @ @ @ @ @ @ @ @ @ @
458 1 Pvi Prosthecochloris vibrioformis DSM265 NC_009337 @ @ @ @ @ NC_009337 @ @ @ @ @ @ @ @
@ @ Deh2 Dehalococcoides BAV1 NC_009455 @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Deh1 Dehalococcoides CBDB1 NC_007356 @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Deh3 Dehalococcoides ethenogenes 195 NC_002936 @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Deh4 Dehalococcoides GT NC_013890 @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Deh5 Dehalococcoides VS NC_013552 @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ @ @ @ @ @ @ @ @ @ @
@ @ Photosynthetic bacteria (green non-sulfur) @ @ @ @ @ @ @ @
454 1 Caur Chloroflexus aurantiacus J 10 fl NC_010175 * CP000909 CA @ @ @ @ @ @ JGI, Jul 2005
@ @ Cagg Chloroflexus aggregans DSM9485 NC_011831 @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Chy4 Chloroflexus Y 400 fl NC_012032 @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Chth Chloroherpeton thalassium ATCC35110 NC_011026 @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Cpar Chlorobaculum parvum NCIB8327 NC_011027 @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Peph Pelodictyon phaeoclathratiforme BU1 NC_011060 @ @ @ @ @ @ @ @ @ @ @ @ @ @
32 1 Cvi Chromobacterium violaceum ATCC 12472 [beta] NC_005085 @ @ @ @ @ NC_005085 @ @ @ @ @ @ @ @
@ @ Roca Roseiflexus castenholzii DSM13941 NC_009767 @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Rors Roseiflexus RS-1 NC_009523 @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Haur Herpetosiphon aurantiacus ATCC23779 NC_009972-4 @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Thro Thermomicrobium roseum DSM5159 NC_011959,61 @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Sthe Sphaerobacter thermophilus DSM20745 NC_013523,4 @ @ @ @ @ @ @ @ @ @ @ @ @ @
467 1 Hmo Heliobacterium modesticaldum [Firmicutes] NC_010337 * CP000930 @ @ @ @ @ @ @ @ @
@ @ Eryl Erythrobacter litoralis HTCC2594 NC_007722 @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Plants @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
601 3 ATH Arabidopsis thaliana NCBI 2009 @ @ @ @ @ NC_003070,1,4-6 (2007) ATH NC_003070,1,4-6 (2005) @ NC_003070,1,4-6 (2005) NC_003070,1,4-6 (2004) @ @ @
601 11 ATHc Arabidopsis thaliana chloroplast @ @ @ @ @ @ @ ATHc @ @ @ AP000423 @ @ @
601 7 ATHmt Arabidopsis thaliana mitochondrion @ @ @ @ @ @ @ ATHmt @ @ @ Y08501 @ @ @
602 3 CME Cyanidioschyzon merolae @ @ @ @ @ @ @ CME @ @ @ CGP (2004) @ @ @
602 11 CMEc Cyanidioschyzon merolae chloroplast @ @ @ @ @ @ @ CMEc @ @ @ AB002583 @ @ @
602 7 CMEmt Cyanidioschyzon merolae mitochondrion @ @ @ @ @ @ @ CMEmt @ @ @ D89861 @ @ @
603 3 OSA Oryza sativa RAP DB Build5 @ @ @ @ @ Rap1 version3 (2007) OSA @ @ @ @ @ @ -
603 11 OSAc Oryza sativa chloroplast @ @ @ @ @ @ NC_001320 OSAc @ @ @ @ @ NC_001320
603 7 OSAmt Oryza sativa mitochondrion @ @ @ @ @ @ BA000029 OSAmt @ @ @ @ @ BA000029
604 3 PPT Physcomitrella patens same @ @ @ @ @ JGI (2007)@Filtered models 1.1 PPT @ @ @ @ @ -
604 11 PPTc Physcomitrella patens chloroplast @ @ @ @ @ @ AP005672 PPTc @ @ @ @ @ AP005672
604 7 PPTmt Physcomitrella patens mitochondrion @ @ @ @ @ @ AB251495 PPTmt @ @ @ @ @ AB251495
605 3 PoTR Populus trichocarpa same @ @ @ @ @ JGI ver1.1 (2006) PoTR @ @ @ @ @ @ JGI ver1.1 (2006)
605 11 PoTRc Populus trichocarpa chloroplast NC_009143 @ @ @ @ @ @ PoTRc @ @ @ @ @ @ none
605 7 PoTRmt Populus trichocarpa mitochondrion none @ @ @ @ @ @ PoTRmt @ @ @ @ @ @ none
606 3 SMOL Selaginella moellendorffii JGI @ @ @ @ @ @ @ @ @ @ @ @ @
606 11 SMOLc @ none @ @ @ @ @ @ @ @ @ @ @ @ @
606 7 SMOLmt @ none @ @ @ @ @ @ @ @ @ @ @ @ @
607 3 VVI Vitis vinifera NCBI (2009) @ @ @ @ @ @ @ @ @ @ @ @ @
607 11 VVIc @ NC_007957 @ @ @ @ @ @ @ @ @ @ @ @ @
607 7 VVImt @ NC_012119 @ @ @ @ @ @ @ @ @ @ @ @ @
608 3 SoBI Sorghum bicolor BTx623 JGI FilteredModels6 (2009) @ @ @ @ @ @ @ @ @ @ @ @ @
608 11 SoBIc @ NC_008602 @ @ @ @ @ @ @ @ @ @ @ @ @
608 7 SoBImt @ DQ984518 @ @ @ @ @ @ @ @ @ @ @ @ @
609 3 BrDI Brachypodium distachyon 1.0 (2009) @ @ @ @ @ @ @ @ @ @ @ @ @
609 11 BrDIc @ NC_011032 @ @ @ @ @ @ @ @ @ @ @ @ @
609 7 BrDImt @ none @ @ @ @ @ @ @ @ @ @ @ @ @
610 3 LoJA Lotus japonicus MG-20 Kazusa (2009) @ @ @ @ @ @ @ @ @ @ @ @ @
610 11 LoJAc @ NC_002694 @ @ @ @ @ @ @ @ @ @ @ @ @
610 7 LoJAmt @ none @ @ @ @ @ @ @ @ @ @ @ @ @
611 3 MeTR Medicago truncatula MIPS MT3.0 (2010) @ @ @ @ @ @ @ @ @ @ @ @ @
611 11 MeTRc @ NC_003119 @ @ @ @ @ @ @ @ @ @ @ @ @
611 7 MeTRmt @ none @ @ @ @ @ @ @ @ @ @ @ @ @
612 3 MZE Zea mays B73 Arizona 4a.53 (2010) @ @ @ @ @ @ @ @ @ @ @ @ @
612 11 MZEc @ X86563 @ @ @ @ @ @ @ @ @ @ @ @ @
612 7 MZEmt @ AY506529 @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
620 3 CRE Chlamydomonas reinhardtii same @ @ @ @ @ @ CRE JGI ver3.1 (2006) @ @ JGI, 2004 @ @ @
620 11 CREc Chlamydomonas reinhardtii chloroplast @ @ @ @ @ @ @ CREc @ @ NC_005353 BK000554 @ @ @
620 7 CREmt Chlamydomonas reinhardtii mitochondrion @ @ @ @ @ @ @ CREmt @ @ @ U03843 @ @ @
621 3 GTH Guillardia theta @ @ @ @ @ @ none GTH none @ @ - @ @ @
621 11 GTHc Guillardia theta plastid @ @ @ @ @ @ @ GTHc @ @ @ NC_000926 @ @ @
621 19 GTHnm1 Guillardia theta nucleomorph chlorosome 1 @ @ @ @ @ @ @ GTHnm1 @ @ @ NC_002752 @ @ @
621 19 GTHnm2 Guillardia theta nucleomorph chlorosome 2 @ @ @ @ @ @ @ GTHnm2 @ @ @ NC_002753 @ @ @
621 19 GTHnm3 Guillardia theta nucleomorph chlorosome 3 @ @ @ @ @ @ @ GTHnm3 @ @ @ NC_002751 @ @ @
622 3 TPS Thalassiosira pseudonana same @ @ @ @ @ JGI ver3 (2006) Tps JGI ver3 (2006) @ @ JGI version 1 (Feb 2004) @ @ @
622 11 TPSc Thalassiosira pseudonana chloroplast @ @ @ @ @ @ EF067921 Tpsc EF067921 @ @ @ @ @ @
622 7 TPSmt Thalassiosira pseudonana mitochondrion @ @ @ @ @ @ DQ186202 Tpsmt DQ186202 @ @ @ @ @ @
623 3 PTR Phaeodactylum tricornutum same @ @ @ @ @ JGI ver 2 (2006) PTR @ @ @ @ @ @ @
623 11 PTRc Phaeodactylum tricornutum chloroplast @ @ @ @ @ @ EF067920 PTRc @ @ @ @ @ @
623 7 PTRmt Phaeodactylum tricornutum mitochondrion @ @ @ @ @ @ none PTRmt @ @ @ @ @ @ none
624 3 OTAU Ostreococcus tauri OTTH095=OTH95 RCC745-2001 same @ @ @ @ @ JGI ver2 (2006) OTAU JGI ver2 (2006) @ @ @ @ @ @
624 11 OTAUc Ostreococcus tauri chloroplast @ @ @ @ @ @ CR954199 OTAUc CR954199 @ @ @ @ @ @
624 7 OTAUmt Ostreococcus tauri mitochondrion @ @ @ @ @ @ CR954200 OTAUmt CR954200 @ @ @ @ @ @
625 3 OLUC Ostreococcus lucimarinus CCE9901 JGI (2009) @ @ @ @ @ @ @ @ @ @ @ @ @
625 11 OLUCc @ none @ @ @ @ @ @ @ @ @ @ @ @ @
625 7 OLUCmt @ none @ @ @ @ @ @ @ @ @ @ @ @ @
626 3 @ Ostreococcus sp. RCC809 JGI ver. 2 FilteredModels3 (2009) @ @ @ @ @ @ @ @ @ @ @ @ @
626 11 @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
626 7 @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Animals @ @ @ @ @ @ @ @ @ @ @ @ @ @
700 3 CEL Caenorhabditis elegans @ @ @ @ @ @ NC_003279-84 (2006) CE @ @ NC_003279-84 wormpep110 (2003) @ @ @
700 7 CELmt Caenorhabditis elegans mitochondrion @ @ @ @ @ @ NC_001328 (2006) CEmt @ @ @ X54252 (2000) @ @ @
701 3 DME Drosophila melanogaster NC_004353-4,NT_033777-9,NT_037436 (2009) @ @ @ @ @ NC_004354,NT_033777-9,NT_037436 (2005) DM @ @ @ NT_033777-9, NT_037436, NC_004353-4 (2005) @ @ @
701 7 DMEmt Drosophila melanogaster mitochondrion @ @ @ @ @ @ NC_005779 (2007) DMmt @ @ @ NC001709 (1996) @ @ @
702 3 DAGA Anopheles_gambiae @ @ @ @ @ @ NCBI (2007) AG @ @ @ JGI (Aug 2003) @ @ @
702 7 DAGAmt Anopheles_gambiae mitochondrion @ @ @ @ @ @ NC_002084 (2006) AGmt @ @ @ L20934 (1998) @ @ @
703 3 FUGU Takifugu rubripes @ @ @ @ @ @ JGI version4 (Oct. 2004) Fugu @ @ @ JGI version 3 (July 2003) @ @ @
703 7 FUGUmt Takifugu rubripes mitochondrion @ @ @ @ @ @ NC_004299 (2004) Fugumt @ @ @ AJ421455 (2002) @ @ @
704 3 DOG Canis familiaris @ @ @ @ @ @ @ DOG @ @ @ Build 2 (Oct 2005) @ @ @
704 7 DOGmt Canis familiaris mitochondrion @ @ @ @ @ @ @ DOGmt @ @ @ NC_002008 @ @ @
705 3 GAL Gallus gallus @ @ @ @ @ @ RefSeq (2006) GAL @ @ @ Build 1 (Aug 2004) @ @ @
705 7 GALmt Gallus gallus mitochondrion @ @ @ @ @ @ NC_001323 (2005) GALmt @ @ @ AY235570 @ @ @
706 3 MUS Mus musculus @ @ @ @ @ @ @ MUS @ @ @ Build 35 (Dec 2005) @ @ @
706 7 MUSmt Mus musculus mitochondrion @ @ @ @ @ @ @ MUSmt @ @ @ NC_005089 @ @ @
707 3 DRE Danio rerio @ @ @ @ @ @ RefSeq (2007) DRE @ @ @ Build 1 (July 2005) @ @ @
707 7 DREmt Danio rerio mitochondrion @ @ @ @ @ @ NC_002333 (2005) DREmt @ @ @ NC_002333 @ @ @
708 3 XTR Xenopus tropicalis @ @ @ @ @ @ JGI version 4.1 (Aug. 2005) @ @ @ @ @ @ @ @
708 7 XTRmt Xenopus tropicalis mitochondrion @ @ @ @ @ @ NC_006839 @ @ @ @ @ @ @ @
709 3 DCIN Ciona intestinalis @ @ @ @ @ @ JGI version 2 (Oct. 2002) @ @ @ @ @ @ @ @
709 7 DCINmt Ciona intestinalis mitochondrion @ @ @ @ @ @ NC_004447 (2005) @ @ @ @ @ @ @ @
710 3 HSA Homo sapiens RefSeq protein (2009) @ @ @ @ @ RefSeq (2006) @ @ @ @ @ @ @ @
710 7 HSAmt Homo sapiens mitochondrion @ @ @ @ @ @ NC_001807 (2006) @ @ @ @ @ @ @ @
711 3 AME Apis mellifera @ @ @ @ @ @ RefSeq (2007) @ @ @ @ @ @ @ @
711 7 AMEmt Apis mellifera mitochondrion @ @ @ @ @ @ NC_001566 (2004) @ @ @ @ @ @ @ @
712 3 BTAU Bos taurus @ @ @ @ @ @ RefSeq (2007) @ @ @ @ @ @ @ @
712 7 BTAUmt Bos taurus mitochondrion @ @ @ @ @ @ NC_006853 (2006) @ @ @ @ @ @ @ @
713 3 MAMU Macaca mulatta @ @ @ @ @ @ RefSeq (2007) @ @ @ @ @ @ @ @
713 7 MAMUmt Macaca mulatta mitochondrion @ @ @ @ @ @ NC_005943 (2006) @ @ @ @ @ @ @ @
714 3 MDM Monodelphis domestica @ @ @ @ @ @ RefSeq (2007) @ @ @ @ @ @ @ @
714 7 MDMmt Monodelphis domestica mitochondrion @ @ @ @ @ @ NC_006299 (2005) @ @ @ @ @ @ @ @
715 3 PAN Pan troglodytes @ @ @ @ @ @ RefSeq (2006) @ @ @ @ @ @ @ @
715 7 PANmt Pan troglodytes mitochondrion @ @ @ @ @ @ NC_001643 (2004) @ @ @ @ @ @ @ @
716 3 SPU Strangylocentrotus purpuratus @ @ @ @ @ @ RefSeq (2005) @ @ @ @ @ @ @ @
716 7 SPUmt Strangylocentrotus purpuratus mitochondrion @ @ @ @ @ @ NC_001453 (2005) @ @ @ @ @ @ @ @
717 3 OLA Oryzias latipes (Medaka) @ @ @ @ @ @ ENSEMBL(2007) 1.45 @ @ @ @ @ @ @ @
717 7 OLAmt Oryzias latipes (Medaka) mitochondrion @ @ @ @ @ @ NC_004387 (2006) @ @ @ @ @ @ @ @
718 3 GAC Gasterosteus aculeatus (Togeuwo) @ @ @ @ @ @ ENSEMBL (2007) 1.45 @ @ @ @ @ @ @ @
718 7 GACmt Gasterosteus aculeatus (Togeuwo) mitochondrion @ @ @ @ @ @ NC_003174 (2006) @ @ @ @ @ @ @ @
719 3 HYMA Hydra magnipapillata @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
719 7 HYMAmt Hydra magnipapillata mitochondrion @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
720 3 PLAT Ornithorhynchus anatinus (Platypus) @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
720 7 PLATmt Ornithorhynchus anatinus (Platypus) mitochondrion @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Unicellular eukaryotes @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
750 3 SCE Saccharomyces cerevisiae NC001133-48 (2009) @ @ @ @ @ NC001133-48 (2007) SC @ @ NC001133-48 (2006) NC001133-48 (2001) @ @ @
750 7 SCEmt Saccharomyces cerevisiae mitochondrion NC_001224 (2009) @ @ @ @ @ AJ011856 (2000) SCmt @ @ @ AJ011856 (2000) @ @ @
751 3 SPO Schyzosaccharomyces pombe NC_003421-3 (2009) @ @ @ @ @ NC_003421-3 (2002) SP @ @ @ NC_003421-3 (2002) @ @ @
751 7 SPOmt Schyzosaccharomyces pombe mitochondrion NC_001326 @ @ @ @ @ NC_001326 SPmt @ @ @ X54421 (2000) @ @ @
753 3 PFA Plasmodium falciparum 3D7 NC_004314-18,25-31, 000910, 000521 (2007) @ @ @ @ @ @ PFA NC_004314-18,25-31, 000910, 000521 (2006) @ @ AL844501,3-9, AE014185-8,AE001362,AL034556 (2002) @ @ @
753 11 PFAc Plasmodium falciparum plastid same @ @ @ @ @ @ PFAc @ @ @ X95275-6 (1997) @ @ @
754 7 PFAmt Plasmodium falciparum mitochondrion NC_002375 @ @ @ @ @ @ PFAmt @ @ @ NC_002375 @ @ @
754 @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
755 3 NGR Naegleria gruberi (heterolobosea) same @ @ @ @ @ JGI 1.0 (2007) @ @ @ @ @ @ @
755 7 NGRmt Naegleria gruberi mitochondrion @ @ @ @ @ @ NC_002573 (2005) @ @ @ @ @ @ @
756 3 DCGR Candida glabrata CBS138 NC_005967,5968,6026-36 (2008) @ @ @ @ @ NC_005967,5968,6026-36 (2006) @ @ @ @ @ @ @
756 7 DCGRmt Candida glabrata CBS138 mitochondrion @ @ @ @ @ @ @ @ @ @ @ @ @ @
757 3 DKLA Kluyveromyces lactis NRRL Y-1140 NC_006037-42 (2007) @ @ @ @ @ NC_006037-42 (2005) @ @ @ @ @ @ @
757 7 DKLAmt Kluyveromyces lactis NRRL Y-1140 mitochondrion NC_006077 @ @ @ @ @ NC_006077 (2005) @ @ @ @ @ @ @
758 3 NCR Neurospora crassa 74-OR23-1A same @ @ @ @ @ Broad Institute (2007) http://www.broad.mit.edu/annotation/genome/neurospora/Home.html @ @ @ @ @ @
758 7 NCRmt Neurospora crassa 74-OR23-1A mitochondrion @ @ @ @ @ @ Broad Institute (2007) @ @ @ @ @ @ @
759 3 DDI Dictyostelium discoideum AX4 (social amoeba) NC_001889,7087-92 (2007) @ @ @ @ @ dictybase.org (2007) http://dictybase.org/ @ @ @ @ @ @ @
759 7 DDImt Dictyostelium discoideum AX4 mitochondrion NC_000895 @ @ @ @ @ NC_000895 (2006) @ @ @ @ @ @ @
760 3 TET Tetrahymena thermophila SB210 (ciliophora) same @ @ @ @ @ TGD http://www.ciliate.org/ @ @ @ @ @ @ @
760 7 TETmt Tetrahymena thermophila SB210 mitochondrion @ @ @ @ @ @ NC_003029 @ @ @ @ @ @ @
761 3 PHRA Phytophthora ramorum (oomycetes) same @ @ @ @ @ JGI 1.1 (Aug. 2004) @ @ @ @ @ @ @
761 7 PHRAmt Phytophthora ramorum mtochondrion @ @ @ @ @ @ NC_009384 (2007) @ @ @ @ @ @ @
762 3 PHSO Phytophthora sojae (oomycetes) same @ @ @ @ @ JGI 1.1 (Aug. 2004) @ @ @ @ @ @ @
762 7 PHSOmt Phytophthora sojae mitochondrion @ @ @ @ @ @ NC_009385 (2007) @ @ @ @ @ @ @
763 3 DPTM Paramecium tetraurelia (ciliophora) same @ @ @ @ @ ParameciumDB 1.03 (2007) @ @ @ @ @ @ @
763 7 DPTMmt Paramecium aurelia mitochondrion @ @ @ @ @ @ NC_001324 (2006) @ @ @ @ @ @ @
@ @ @ @ @ @ @ @
@ @ Chloroplasts @ @ @ @ @ @ @ @ @ @ @ @ @ @
801 11 ADCc Adiantum chloroplast @ @ @ @ @ @ @ ADCc @ @ @ @ @ AY178864 @
802 11 ANTc Anthoceros chloroplast @ @ @ @ @ @ @ ANTc @ @ @ @ @ AB086179 @
803 11 ASTc Astasia chloroplast @ @ @ @ @ @ @ ASTc @ @ @ @ @ ALO294725 @
804 11 ATRc Atropa chloroplast @ @ @ @ @ @ @ ATRc @ @ @ @ @ NC_004561 @
805 11 CHAc Chaetospheridium globosum chloroplast @ @ @ @ @ @ @ CHAc @ @ @ @ @ NC_004115 @
805 7 CHAmt Chaetospheridium globosum mitochondrion @ @ @ @ @ @ @ CHAmt @ @ @ @ @ AF494279 @
806 11 CHVc Chlorella chloroplast @ @ @ @ @ @ @ CHVc @ @ @ @ @ AB001684 @
807 11 CCAc Cyanidium chloroplast @ @ @ @ @ @ @ CCAc @ @ @ @ @ AF022186 @
808 11 CPAc Cyanophora chloroplast @ @ @ @ @ @ @ CPAc @ @ @ @ @ CPU30821 @
809 11 EPIc Epifagus chloroplast @ @ @ @ @ @ @ EPIc @ @ @ @ @ M81884 @
810 11 EUGc Euglena chloroplast @ @ @ @ @ @ @ EUGc @ @ @ @ @ X70810 @
811 11 MPOc Marchantia polymorpha chloroplast @ @ @ @ @ @ @ MPOc @ @ @ @ @ X04465 @
811 7 MPOmt Marchantia polymorpha mitochondrion @ @ @ @ @ @ @ MPOmt @ @ @ @ @ M68929 @
812 11 MSTc Mesostigma viride chloroplast @ @ @ @ @ @ @ MSTc @ @ @ @ @ AF166114 @
812 7 MSTmt Mesostigma viride mitochondrion @ @ @ @ @ @ @ MSTmt @ @ @ @ @ AF353999 @
813 11 NEPc Nephroselmis olivacea chloroplast @ @ @ @ @ @ @ NEPc @ @ @ @ @ NC_000927 @
813 7 NEPmt Nephroselmis olivacea mitochondrion @ @ @ @ @ @ @ NEPmt @ @ @ @ @ AF110138 @
814 11 ODOc Odontella chloroplast @ @ @ @ @ @ @ ODOc @ @ @ @ @ NC_001713 @
815 11 OENc Oenothera chloroplast @ @ @ @ @ @ @ OENc @ @ @ @ @ AJ271079 @
816 11 PINc Pine chloroplast @ @ @ @ @ @ @ PINc @ @ @ @ @ D17510 @
817 11 PPUc Porphyra purpurea chloroplast @ @ @ @ @ @ @ PPUc @ @ @ @ @ U38804 @
817 7 PPUmt Porphyra purpurea mitochondrion @ @ @ @ @ @ @ PPUmt @ @ @ @ @ AF114794 @
818 11 PSIc Psilotum chloroplast @ @ @ @ @ @ @ PSIc @ @ @ @ @ AP004638 @
819 11 SPIc Spinacia chloroplast @ @ @ @ @ @ @ SPIc @ @ @ @ @ AJ400848 @
820 11 TOBc Tobacco chloroplast @ @ @ @ @ @ @ TOBc @ @ @ @ @ NC_001879 @
820 7 TOBmt Tobacco mitochondrion @ @ @ @ @ @ @ TOBmt @ @ @ @ @ BA000042 @
821 11 TOXc Toxoplasma plastid @ @ @ @ @ @ @ TOXc @ @ NC001799 @ @ U87145 @
822 11 WHTc Wheat chloroplast @ @ @ @ @ @ @ WHTc @ @ @ @ @ NC_002762 @
823 11 AMBc Amborella trichopoda chloroplast @ @ @ @ @ @ @ AMBc @ @ @ @ @ ATR506156 @
824 11 CFEc Calycanthus fertilis var. ferax chloroplast @ @ @ @ @ @ @ CFEc @ @ @ @ @ CFE428413 @
825 11 ETEc Eimeria tenella chloroplast @ @ @ @ @ @ @ ETEc @ @ @ @ @ AY217738 @
826 11 EHUc Emiliania huxleyi strain CCMP 373 chloroplast @ @ @ @ @ @ @ EHUc @ @ @ @ @ AY741371 @
826 7 EHUmt Emiliania huxleyi strain CCMP 373 mitochondrion @ @ @ @ @ @ @ EHUmt @ @ @ @ @ AY342361 @
827 11 GTEc Gracilaria tenuistipitata var. liui chloroplast @ @ @ @ @ @ @ GTEc @ @ @ @ @ AY673996 @
828 11 HLUc Huperzia lucidula chloroplast @ @ @ @ @ @ @ HLUc @ @ @ @ @ AY660566 @
829 11 NALc Nymphaea alba chloroplast @ @ @ @ @ @ @ NALc @ @ @ @ @ AJ627251 @
830 11 ONIc Oryza nivara chloroplast @ @ @ @ @ @ @ ONIc @ @ @ @ @ AP006728 @
831 11 PGIc Panax ginseng chloroplast @ @ @ @ @ @ @ PGIc @ @ @ @ @ AY582139 @
832 11 PKOc Pinus koraiensis chloroplast @ @ @ @ @ @ @ PKOc @ @ @ @ @ NC_004677 @
833 11 SHYc Saccharum hybrid cultivar SP-80-3280 chloroplast @ @ @ @ @ @ @ SHYc @ @ @ @ @ AE009947 @
834 11 SACc Saccharum officinarum chloroplast @ @ @ @ @ @ @ SACc @ @ @ @ @ AP006714 @
835 11 CUCc Cucumis sativus chloroplast @ @ @ @ @ @ @ CUCc @ @ @ @ @ AJ970307 @
836 11 PYEc Porphyra yezoensis chloroplast @ @ @ @ @ NC_007932 @ @ @ @ @ @ @
837 11 SHEc Stigeoclonium helveticum chloroplast @ @ @ @ @ NC_008372 @ @ @ @ @ @ @
838 11 OVIc Oltmannsiellopsis viridis chloroplast @ @ @ @ @ NC_008099 @ @ @ @ @ @ @
839 11 LTEc Leptosira terrestris chloroplast @ @ @ @ @ NC_009681 @ @ @ @ @ @ @
840 11 CATc Chlorokybus atmophyticus chloroplast @ @ @ @ @ NC_008822 @ @ @ @ @ @ @
841 11 AEVc Angiopteris evecta chloroplast @ @ @ @ @ NC_008829 @ @ @ @ @ @ @
842 11 StPUc Staurastrum punctulatum chloroplast @ @ @ @ @ NC_008116 @ @ @ @ @ @ @
843 11 ZCIc Zygnema circumcarinatum @ @ @ @ @ NC_008117 @ @ @ @ @ @ @
844 11 BNAc Bigelowiella natans chloroplast @ @ @ @ @ NC_008408 @ @ @ @ @ @ @
845 11 PCHRc Paulinella chromatophora chloroplast @ @ @ NC_011087 @ CP000815 @ @ @ @ @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @ @
@ @ Mitochondria @ @ @ @ @ @ @ @ @ @ @ @ @ @
901 7 CCRmt Chondrus crispus mitochondrion @ @ @ @ @ @ @ CCRmt @ @ @ @ Z47547 @ @
902 7 PEDmt Pedinomonas minor mitochondrion @ @ @ @ @ @ @ PEDmt @ @ @ @ AF116775 @ @
903 7 PLImt Pilayella littoraris mitochondrion @ @ @ @ @ @ @ PLImt @ @ @ @ AJ277126 @ @
904 7 RSAmt Rhodomonas salina mitochondrion @ @ @ @ @ @ @ RSAmt @ @ @ @ AF288090 @ @
905 11 RSAc Rhodomonas salina chloroplast @ @ @ @ @ @ NC_009573 @ @ @ @ @ @ @
906 7 RECmt Reclinomonas americana mitochondrion @ @ @ @ @ @ @ RECmt @ @ @ @ NC_001823 @ @
907 7 CHRmt Chara vulgaris mitochondrion @ @ @ @ @ @ @ CHRmt @ @ @ @ NC_005255 @ @
908 7 PWImt Prototheca wickerhamii mitochondrion @ @ @ @ @ @ @ PWImt @ @ @ @ NC_001613 @ @
909 7 PDCmt Pseudendoclonium akinetum mitochondrion @ @ @ @ @ @ @ PDCmt @ @ @ @ NC_005926 @ @
910 11 PDCc Pseudendoclonium akinetum chloroplast @ @ @ @ @ @ NC_008114 @ @ @ @ @ @ @
911 7 CEUmt Chlamydomonas eugametos mitochondrion @ @ @ @ @ @ @ CEUmt @ @ @ @ NC_001872 @ @
912 7 SCNmt Scenedesmus obliquus mitochondrion @ @ @ @ @ @ @ SCNmt @ @ @ @ AF204057 @ @
913 11 SCNc Scenedesmus obliquus chloroplast @ @ @ @ @ @ NC_008101 @ @ @ @ @ @ @